All modules for which code is available
- dnachisel.DnaOptimizationProblem.CircularDnaOptimizationProblem
- dnachisel.DnaOptimizationProblem.DnaOptimizationProblem
- dnachisel.Location
- dnachisel.MutationSpace.MutationChoice
- dnachisel.MutationSpace.MutationSpace
- dnachisel.SequencePattern.DnaNotationPattern
- dnachisel.SequencePattern.EnzymeSitePattern
- dnachisel.SequencePattern.HomopolymerPattern
- dnachisel.SequencePattern.MotifPssmPattern
- dnachisel.SequencePattern.RepeatedKmerPattern
- dnachisel.SequencePattern.SequencePattern
- dnachisel.Specification.Specification
- dnachisel.biotools.blast_sequence
- dnachisel.biotools.bowtie
- dnachisel.biotools.enzymes_operations
- dnachisel.biotools.formatting_operations
- dnachisel.biotools.gc_content
- dnachisel.biotools.genbank_operations
- dnachisel.biotools.indices_operations
- dnachisel.biotools.random_sequences
- dnachisel.biotools.sequences_differences
- dnachisel.biotools.sequences_operations
- dnachisel.builtin_specifications.AllowPrimer
- dnachisel.builtin_specifications.AvoidBlastMatches
- dnachisel.builtin_specifications.AvoidChanges
- dnachisel.builtin_specifications.AvoidHairpins
- dnachisel.builtin_specifications.AvoidMatches
- dnachisel.builtin_specifications.AvoidPattern
- dnachisel.builtin_specifications.AvoidStopCodons
- dnachisel.builtin_specifications.EnforceGCContent
- dnachisel.builtin_specifications.EnforceMeltingTemperature
- dnachisel.builtin_specifications.EnforcePatternOccurence
- dnachisel.builtin_specifications.EnforceRegionsCompatibility
- dnachisel.builtin_specifications.EnforceSequence
- dnachisel.builtin_specifications.EnforceTranslation
- dnachisel.builtin_specifications.SequenceLengthBounds
- dnachisel.builtin_specifications.UniquifyAllKmers
- dnachisel.builtin_specifications.codon_optimization.AvoidRareCodons
- dnachisel.builtin_specifications.codon_optimization.CodonOptimize
- dnachisel.builtin_specifications.codon_optimization.HarmonizeRCA
- dnachisel.builtin_specifications.codon_optimization.MatchTargetCodonUsage
- dnachisel.builtin_specifications.codon_optimization.MaximizeCAI
- dnachisel.reports.constraints_reports.GraphicTranslator
- dnachisel.reports.constraints_reports.constraints_breaches_dataframe
- dnachisel.reports.constraints_reports.constraints_reports
- dnachisel.reports.optimization_reports